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  5. AT4G36960

AT4G36960


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0005140 (Archaeplastida) Phylogenetic Tree(s): OG0005140_tree ,
OG_05_0004209 (LandPlants) Phylogenetic Tree(s): OG_05_0004209_tree ,
OG_06_0006102 (SeedPlants) Phylogenetic Tree(s): OG_06_0006102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G36960
Cluster HCCA: Cluster_4


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Neighborhood
CC GO:0000793 condensed chromosome IEP Neighborhood
CC GO:0000794 condensed nuclear chromosome IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0005451 monovalent cation:proton antiporter activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009880 embryonic pattern specification IEP Neighborhood
BP GO:0010072 primary shoot apical meristem specification IEP Neighborhood
BP GO:0010265 SCF complex assembly IEP Neighborhood
BP GO:0010351 lithium ion transport IEP Neighborhood
BP GO:0010431 seed maturation IEP Neighborhood
MF GO:0015385 sodium:proton antiporter activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016208 AMP binding IEP Neighborhood
BP GO:0034599 cellular response to oxidative stress IEP Neighborhood
BP GO:0034614 cellular response to reactive oxygen species IEP Neighborhood
BP GO:0035690 cellular response to drug IEP Neighborhood
BP GO:0035725 sodium ion transmembrane transport IEP Neighborhood
BP GO:0042752 regulation of circadian rhythm IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0045116 protein neddylation IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
MF GO:0052638 indole-3-butyrate beta-glucosyltransferase activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070301 cellular response to hydrogen peroxide IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071215 cellular response to abscisic acid stimulus IEP Neighborhood
BP GO:0071236 cellular response to antibiotic IEP Neighborhood
BP GO:0071396 cellular response to lipid IEP Neighborhood
BP GO:0071470 cellular response to osmotic stress IEP Neighborhood
BP GO:0071472 cellular response to salt stress IEP Neighborhood
BP GO:0071474 cellular hyperosmotic response IEP Neighborhood
BP GO:0071475 cellular hyperosmotic salinity response IEP Neighborhood
BP GO:0080024 indolebutyric acid metabolic process IEP Neighborhood
BP GO:0097237 cellular response to toxic substance IEP Neighborhood
BP GO:0097306 cellular response to alcohol IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 242 298
IPR000504 RRM_dom 5 66
IPR000504 RRM_dom 93 158
No external refs found!