AT4G37010 (CEN2)

Aliases : CEN2

Description : centrin 2

Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0002452 (LandPlants) Phylogenetic Tree(s): OG_05_0002452_tree ,
OG_06_0002735 (SeedPlants) Phylogenetic Tree(s): OG_06_0002735_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G37010
Cluster	HCCA: Cluster_174

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00186360	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00053p00122010	evm_27.TU.AmTr_v1...	Probable calcium-binding protein CML35 OS=Arabidopsis thaliana	0.03	Archaeplastida
AT1G05990	RHS1	EF hand calcium-binding protein family	0.04	Archaeplastida
AT2G15680	No alias	Calcium-binding EF-hand family protein	0.03	Archaeplastida
AT2G41090	No alias	Calcium-binding EF-hand family protein	0.04	Archaeplastida
AT3G29000	No alias	Calcium-binding EF-hand family protein	0.04	Archaeplastida
AT4G14640	AtCML8, CAM8	calmodulin 8	0.08	Archaeplastida
GSVIVT01003796001	No alias	Calmodulin-like protein 3 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01011435001	No alias	Probable calcium-binding protein CML45 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01025831001	No alias	Calmodulin OS=Lilium longiflorum	0.04	Archaeplastida
Gb_23652	No alias	Probable calcium-binding protein CML25 OS=Arabidopsis...	0.03	Archaeplastida
Gb_28442	No alias	Calmodulin-like protein 2 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Gb_28443	No alias	Calmodulin-like protein 2 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Gb_30819	No alias	Calmodulin-like protein 5 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os01g59530.1	No alias	Calmodulin-like protein 1 OS=Oryza sativa subsp....	0.04	Archaeplastida
LOC_Os01g72080.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os03g21380.2	No alias	Probable calcium-binding protein CML27 OS=Oryza sativa...	0.03	Archaeplastida
LOC_Os03g53200.1	No alias	Calmodulin-like protein 4 OS=Oryza sativa subsp....	0.04	Archaeplastida
LOC_Os03g59770.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os05g24780.1	No alias	Probable calcium-binding protein CML21 OS=Oryza sativa...	0.04	Archaeplastida
LOC_Os06g07560.1	No alias	Probable calcium-binding protein CML30 OS=Oryza sativa...	0.04	Archaeplastida
LOC_Os07g12240.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os10g25010.1	No alias	DNA repair protein (CEN2). centrin component CEN of...	0.04	Archaeplastida
LOC_Os11g04560.1	No alias	Probable calcium-binding protein CML36 OS=Arabidopsis...	0.04	Archaeplastida
LOC_Os11g38780.1	No alias	no description available(sp\|q93z27\|cml46_arath : 99.8)	0.04	Archaeplastida
LOC_Os12g04360.1	No alias	Probable calcium-binding protein CML36 OS=Arabidopsis...	0.02	Archaeplastida
LOC_Os12g41110.1	No alias	Calmodulin-like protein 5 OS=Oryza sativa subsp....	0.04	Archaeplastida
MA_10124165g0020	No alias	Probable calcium-binding protein CML10 OS=Oryza sativa...	0.02	Archaeplastida
MA_10431273g0010	No alias	Calmodulin-like protein 5 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10432950g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_1190858g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_130379g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_13199g0010	No alias	Probable calcium-binding protein CML27 OS=Oryza sativa...	0.07	Archaeplastida
MA_194997g0010	No alias	no description available(sp\|a0t2m3\|polc4_hesar : 130.0)	0.05	Archaeplastida
MA_27386g0010	No alias	Probable calcium-binding protein CML27 OS=Oryza sativa...	0.07	Archaeplastida
MA_393053g0010	No alias	Calmodulin-like protein 5 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_52449g0010	No alias	Calmodulin-related protein OS=Petunia hybrida...	0.02	Archaeplastida
MA_641437g0010	No alias	Calcium-binding protein CML42 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_66990g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_7799814g0010	No alias	Calcium-binding protein CML42 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_8749g0010	No alias	Calcium-binding protein CML42 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_9257733g0010	No alias	Calcium-binding protein CAST OS=Solanum tuberosum...	0.03	Archaeplastida
Mp6g18000.1	No alias	Calmodulin-like protein 3 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Mp6g20450.1	No alias	Probable calcium-binding protein CML22 OS=Oryza sativa...	0.03	Archaeplastida
Mp6g20470.1	No alias	Probable calcium-binding protein CML22 OS=Oryza sativa...	0.02	Archaeplastida
Pp3c12_6548V3.1	No alias	EF hand calcium-binding protein family	0.02	Archaeplastida
Pp3c13_2400V3.1	No alias	EF hand calcium-binding protein family	0.02	Archaeplastida
Pp3c14_8590V3.1	No alias	calmodulin 5	0.02	Archaeplastida
Pp3c6_1770V3.1	No alias	EF hand calcium-binding protein family	0.02	Archaeplastida
Smo270984	No alias	Calmodulin-5 OS=Arabidopsis thaliana	0.03	Archaeplastida
Smo83841	No alias	Calmodulin-5/6/7/8 OS=Solanum tuberosum	0.02	Archaeplastida
Smo91501	No alias	Probable calcium-binding protein CML10 OS=Oryza sativa...	0.04	Archaeplastida
Solyc03g098050.3.1	No alias	Calmodulin OS=Solanum lycopersicum (sp\|p27161\|calm_sollc : 234.0)	0.02	Archaeplastida
Solyc03g118810.1.1	No alias	Calcium-binding allergen Ole e 8 OS=Olea europaea...	0.04	Archaeplastida
Solyc10g074740.2.1	No alias	Calcium-binding protein CAST OS=Solanum tuberosum...	0.03	Archaeplastida
Solyc10g081170.2.1	No alias	Calmodulin-related protein OS=Petunia hybrida...	0.02	Archaeplastida
Zm00001e001501_P001	No alias	Calmodulin-related protein OS=Petunia hybrida...	0.02	Archaeplastida
Zm00001e012873_P001	No alias	DNA repair protein (CEN2). centrin component CEN of...	0.03	Archaeplastida
Zm00001e019509_P001	No alias	Calmodulin-like protein 1 OS=Oryza sativa subsp. indica...	0.02	Archaeplastida
Zm00001e024051_P001	No alias	Putative calmodulin-like protein 2 OS=Oryza sativa...	0.03	Archaeplastida
Zm00001e031053_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e038252_P001	No alias	Probable calcium-binding protein CML27 OS=Oryza sativa...	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IDA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006928	movement of cell or subcellular component	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030048	actin filament-based movement	RCA	Interproscan
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051645	Golgi localization	RCA	Interproscan
BP	GO:0051646	mitochondrion localization	RCA	Interproscan
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060151	peroxisome localization	RCA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004566	beta-glucuronidase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005242	inward rectifier potassium channel activity	IEP	Neighborhood
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005496	steroid binding	IEP	Neighborhood
MF	GO:0005545	1-phosphatidylinositol binding	IEP	Neighborhood
CC	GO:0005881	cytoplasmic microtubule	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
MF	GO:0008142	oxysterol binding	IEP	Neighborhood
MF	GO:0008493	tetracycline transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009624	response to nematode	IEP	Neighborhood
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010043	response to zinc ion	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
CC	GO:0010168	ER body	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0015665	alcohol transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
MF	GO:0016174	NAD(P)H oxidase activity	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
CC	GO:0017119	Golgi transport complex	IEP	Neighborhood
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	IEP	Neighborhood
BP	GO:0031111	negative regulation of microtubule polymerization or depolymerization	IEP	Neighborhood
BP	GO:0031113	regulation of microtubule polymerization	IEP	Neighborhood
BP	GO:0031115	negative regulation of microtubule polymerization	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031333	negative regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0032272	negative regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032886	regulation of microtubule-based process	IEP	Neighborhood
MF	GO:0032934	sterol binding	IEP	Neighborhood
MF	GO:0035252	UDP-xylosyltransferase activity	IEP	Neighborhood
MF	GO:0038023	signaling receptor activity	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
MF	GO:0042285	xylosyltransferase activity	IEP	Neighborhood
BP	GO:0042343	indole glucosinolate metabolic process	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
MF	GO:0042895	antibiotic transmembrane transporter activity	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
MF	GO:0045431	flavonol synthase activity	IEP	Neighborhood
BP	GO:0048766	root hair initiation	IEP	Neighborhood
BP	GO:0048768	root hair cell tip growth	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Neighborhood
CC	GO:0055028	cortical microtubule	IEP	Neighborhood
MF	GO:0060089	molecular transducer activity	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0070507	regulation of microtubule cytoskeleton organization	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0099094	ligand-gated cation channel activity	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
MF	GO:1901618	organic hydroxy compound transmembrane transporter activity	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Neighborhood
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	100	162
IPR002048	EF_hand_dom	26	88

External Links

No external refs found!

AT4G37010 (CEN2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation