1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c4_9140V3.1

Pp3c4_9140V3.1


Description : 20S proteasome alpha subunit C1


Gene families : OG0003320 (Archaeplastida) Phylogenetic Tree(s): OG0003320_tree ,
OG_05_0004054 (LandPlants) Phylogenetic Tree(s): OG_05_0004054_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_9140V3.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.21 No alias Protein degradation.26S proteasome.20S core... 0.06 Archaeplastida
Cre10.g418100 No alias Protein degradation.26S proteasome.20S core... 0.1 Archaeplastida
Gb_31719 No alias component alpha type-3 of 26S proteasome 0.02 Archaeplastida
LOC_Os06g07140.1 No alias component alpha type-3 of 26S proteasome 0.05 Archaeplastida
MA_474079g0010 No alias component alpha type-3 of 26S proteasome 0.03 Archaeplastida
Mp1g16770.1 No alias component alpha type-3 of 26S proteasome 0.02 Archaeplastida
Solyc02g081700.1.1 No alias component alpha type-3 of 26S proteasome 0.07 Archaeplastida
Zm00001e030110_P001 No alias component alpha type-3 of 26S proteasome 0.05 Archaeplastida
Zm00001e036395_P002 No alias component alpha type-3 of 26S proteasome 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!