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  5. Pp3c5_10340V3.1

Pp3c5_10340V3.1


Description : rhamnose biosynthesis 1


Gene families : OG0000898 (Archaeplastida) Phylogenetic Tree(s): OG0000898_tree ,
OG_05_0001833 (LandPlants) Phylogenetic Tree(s): OG_05_0001833_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_10340V3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT1G53500 ATRHM2, RHM2,... NAD-dependent epimerase/dehydratase family protein 0.03 Archaeplastida
GSVIVT01014091001 No alias Carbohydrate metabolism.nucleotide sugar... 0.05 Archaeplastida
Gb_18288 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
MA_10105635g0010 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
MA_10431083g0010 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
Smo266803 No alias Carbohydrate metabolism.nucleotide sugar... 0.02 Archaeplastida
Solyc08g069110.3.1 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
Zm00001e001242_P002 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
Zm00001e015435_P001 No alias UDP-L-rhamnose synthase 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!