AT4G37170

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG0017699 (Archaeplastida) Phylogenetic Tree(s): OG0017699_tree ,
OG_05_0017489 (LandPlants) Phylogenetic Tree(s): OG_05_0017489_tree ,
OG_06_0017045 (SeedPlants) Phylogenetic Tree(s): OG_06_0017045_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G37170
Cluster	HCCA: Cluster_232

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_29805	No alias	Pentatricopeptide repeat-containing protein At2g22070...	0.04	Archaeplastida
MA_9741g0010	No alias	Pentatricopeptide repeat-containing protein At4g02750...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	557	681
IPR002885	Pentatricopeptide_repeat	282	330
IPR002885	Pentatricopeptide_repeat	383	430
IPR002885	Pentatricopeptide_repeat	458	483
IPR002885	Pentatricopeptide_repeat	153	180
IPR002885	Pentatricopeptide_repeat	121	149
IPR002885	Pentatricopeptide_repeat	183	210
IPR002885	Pentatricopeptide_repeat	523	553
IPR002885	Pentatricopeptide_repeat	86	116

External Links

No external refs found!