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  5. Pp3c5_12930V3.1

Pp3c5_12930V3.1


Description : helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding


Gene families : OG0002210 (Archaeplastida) Phylogenetic Tree(s): OG0002210_tree ,
OG_05_0003355 (LandPlants) Phylogenetic Tree(s): OG_05_0003355_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_12930V3.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00218p00024050 evm_27.TU.AmTr_v1... DNA damage response.DNA repair polymerase activities.DNA... 0.03 Archaeplastida
Cpa|evm.model.tig00021246.11 No alias Helicase and polymerase-containing protein TEBICHI... 0.02 Archaeplastida
Gb_33083 No alias DNA polymerase theta (TEB) 0.04 Archaeplastida
LOC_Os12g19370.1 No alias DNA polymerase theta (TEB) 0.02 Archaeplastida
MA_10435776g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g068110.1.1 No alias Helicase and polymerase-containing protein TEBICHI... 0.03 Archaeplastida
Solyc08g068120.3.1 No alias No annotation 0.04 Archaeplastida
Zm00001e039655_P002 No alias DNA polymerase theta (TEB) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!