Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c5_15090V3.1 | |
Cluster | HCCA: Cluster_235 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00160280 | No alias | Pentatricopeptide repeat-containing protein At2g29760,... | 0.02 | Archaeplastida | |
AMTR_s00011p00195950 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g22150,... | 0.03 | Archaeplastida | |
AMTR_s00014p00090010 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | Archaeplastida | |
AMTR_s00022p00075660 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | Archaeplastida | |
AMTR_s00044p00169670 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g17210... | 0.02 | Archaeplastida | |
AMTR_s00077p00191560 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.01 | Archaeplastida | |
AMTR_s00170p00032020 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g16860... | 0.01 | Archaeplastida | |
AT1G25360 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
AT1G56570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
AT2G03380 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
AT2G33680 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
AT3G02010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Archaeplastida | |
AT3G15130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT3G49142 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT4G14850 | LOI1, MEF11 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
AT4G21300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | Archaeplastida | |
AT4G33990 | EMB2758 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Archaeplastida | |
AT5G06540 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
AT5G09950 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT5G52850 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Archaeplastida | |
GSVIVT01002055001 | No alias | Nucleotide metabolism.deoxynucleotide metabolism.thymidine kinase | 0.01 | Archaeplastida | |
GSVIVT01021576001 | No alias | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.02 | Archaeplastida | |
Gb_11981 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.01 | Archaeplastida | |
Gb_24633 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.01 | Archaeplastida | |
Gb_25046 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
Gb_25869 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.02 | Archaeplastida | |
Gb_38938 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
LOC_Os03g32620.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
LOC_Os04g14450.1 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.02 | Archaeplastida | |
LOC_Os05g24150.1 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.02 | Archaeplastida | |
LOC_Os05g38190.2 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | Archaeplastida | |
LOC_Os07g19400.1 | No alias | Pentatricopeptide repeat-containing protein At1g71490... | 0.02 | Archaeplastida | |
LOC_Os11g45410.1 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
MA_50789g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | Archaeplastida | |
MA_668740g0020 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.01 | Archaeplastida | |
MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.01 | Archaeplastida | |
MA_7907g0020 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.01 | Archaeplastida | |
Smo113974 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Smo72131 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.01 | Archaeplastida | |
Smo79732 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
Solyc01g100800.2.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
Solyc12g099850.1.1 | No alias | Pentatricopeptide repeat-containing protein At1g18485... | 0.02 | Archaeplastida | |
Zm00001e013531_P001 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.01 | Archaeplastida | |
Zm00001e020567_P001 | No alias | RNA editing factor (MEF7) | 0.02 | Archaeplastida | |
Zm00001e028503_P001 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Neighborhood |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0043015 | gamma-tubulin binding | IEP | Neighborhood |
BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | Neighborhood |
BP | GO:0070085 | glycosylation | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |