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  5. Pp3c5_15520V3.1

Pp3c5_15520V3.1


Description : pleiotropic regulatory locus 1


Gene families : OG0005872 (Archaeplastida) Phylogenetic Tree(s): OG0005872_tree ,
OG_05_0006922 (LandPlants) Phylogenetic Tree(s): OG_05_0006922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_15520V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000880.13 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
Cre10.g446900 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 Archaeplastida
GSVIVT01035143001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 Archaeplastida
LOC_Os03g21990.1 No alias component PRL1/MAC2 of non-snRNP MOS4-associated complex 0.02 Archaeplastida
Mp6g09620.1 No alias component PRL1/MAC2 of non-snRNP MOS4-associated complex 0.03 Archaeplastida
Zm00001e005096_P001 No alias component PRL1/MAC2 of non-snRNP MOS4-associated complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!