Description : SC35-like splicing factor 30A
Gene families : OG0001329 (Archaeplastida) Phylogenetic Tree(s): OG0001329_tree ,
OG_05_0001146 (LandPlants) Phylogenetic Tree(s): OG_05_0001146_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c5_15610V3.1 | |
Cluster | HCCA: Cluster_156 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000402.16 | No alias | RNA processing.RNA splicing.spliceosome-associated... | 0.01 | Archaeplastida | |
GSVIVT01022010001 | No alias | RNA processing.RNA splicing.spliceosome-associated... | 0.03 | Archaeplastida | |
LOC_Os02g15310.1 | No alias | SCL28/30/33 RNA splicing factor | 0.03 | Archaeplastida | |
Solyc01g005820.4.1 | No alias | SCL28/30/33 RNA splicing factor | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000139 | Golgi membrane | IEP | Neighborhood |
MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006281 | DNA repair | IEP | Neighborhood |
BP | GO:0006289 | nucleotide-excision repair | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
BP | GO:0009056 | catabolic process | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | Neighborhood |
MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Neighborhood |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0030163 | protein catabolic process | IEP | Neighborhood |
CC | GO:0031090 | organelle membrane | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
CC | GO:0044431 | Golgi apparatus part | IEP | Neighborhood |
BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Neighborhood |
CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
BP | GO:1901264 | carbohydrate derivative transport | IEP | Neighborhood |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Neighborhood |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |