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  5. Pp3c5_16820V3.1

Pp3c5_16820V3.1


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG0002755 (Archaeplastida) Phylogenetic Tree(s): OG0002755_tree ,
OG_05_0002363 (LandPlants) Phylogenetic Tree(s): OG_05_0002363_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_16820V3.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00246950 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog D... 0.07 Archaeplastida
AT2G18330 No alias AAA-type ATPase family protein 0.04 Archaeplastida
AT3G03060 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT5G16930 No alias AAA-type ATPase family protein 0.12 Archaeplastida
GSVIVT01018945001 No alias Cell division control protein 48 homolog D... 0.13 Archaeplastida
GSVIVT01024407001 No alias 26S proteasome regulatory subunit 6A homolog OS=Solanum... 0.08 Archaeplastida
Gb_39829 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g46990.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_24945g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g01020.1 No alias no hits & (original description: none) 0.13 Archaeplastida
Smo168159 No alias 26S proteasome regulatory subunit 6B homolog... 0.06 Archaeplastida
Solyc02g062700.3.1 No alias Cell division control protein 48 homolog D... 0.07 Archaeplastida
Solyc03g097020.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e015525_P002 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e015589_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e023292_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e023330_P001 No alias no hits & (original description: none) 0.16 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!