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  5. Pp3c5_20100V3.1

Pp3c5_20100V3.1


Description : tubulin beta 8


Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree ,
OG_05_0000074 (LandPlants) Phylogenetic Tree(s): OG_05_0000074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_20100V3.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01021707001 No alias Tubulin beta chain (Fragment) OS=Glycine max 0.05 Archaeplastida
LOC_Os03g56810.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
MA_230579g0010 No alias Tubulin beta-8 chain OS=Zea mays (sp|q41785|tbb8_maize : 281.0) 0.02 Archaeplastida
MA_72744g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Pp3c8_2420V3.1 No alias tubulin beta chain 2 0.02 Archaeplastida
Smo186992 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Smo23468 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Zm00001e005208_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e008575_P001 No alias Tubulin beta-2 chain OS=Eleusine indica... 0.02 Archaeplastida
Zm00001e012336_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e013716_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e025464_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e037773_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!