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  5. Pp3c5_2020V3.1

Pp3c5_2020V3.1


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG0000075 (Archaeplastida) Phylogenetic Tree(s): OG0000075_tree ,
OG_05_0000224 (LandPlants) Phylogenetic Tree(s): OG_05_0000224_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_2020V3.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00214230 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00101p00083450 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os01g64450.1 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os09g36210.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc01g009160.2.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e020501_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034803_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 96 204
No external refs found!