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  5. Pp3c5_20530V3.1

Pp3c5_20530V3.1


Description : Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)


Gene families : OG0005204 (Archaeplastida) Phylogenetic Tree(s): OG0005204_tree ,
OG_05_0005308 (LandPlants) Phylogenetic Tree(s): OG_05_0005308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_20530V3.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00149090 evm_27.TU.AmTr_v1... RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G10490 No alias Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) 0.09 Archaeplastida
AT3G57940 No alias Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) 0.16 Archaeplastida
Cre03.g192850 No alias RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.11 Archaeplastida
GSVIVT01022250001 No alias RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.14 Archaeplastida
Gb_28297 No alias tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.07 Archaeplastida
LOC_Os12g07300.1 No alias tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.15 Archaeplastida
MA_10435179g0010 No alias tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.03 Archaeplastida
MA_434225g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g04980.1 No alias tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.1 Archaeplastida
Smo140315 No alias RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.08 Archaeplastida
Solyc04g051670.3.1 No alias tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.16 Archaeplastida
Zm00001e026623_P001 No alias tRNA/rRNA cytidine acetyltransferase. rRNA cytidine... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!