Pp3c5_20690V3.1


Description : tubulin beta 8


Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree ,
OG_05_0000074 (LandPlants) Phylogenetic Tree(s): OG_05_0000074_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_20690V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00119100 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
AMTR_s00032p00056500 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
AMTR_s00101p00135960 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
AT1G20010 TUB5 tubulin beta-5 chain 0.03 Archaeplastida
AT4G20890 TUB9 tubulin beta-9 chain 0.03 Archaeplastida
AT5G12250 TUB6 beta-6 tubulin 0.03 Archaeplastida
AT5G44340 TUB4 tubulin beta chain 4 0.02 Archaeplastida
Gb_15590 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Gb_29799 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Gb_33450 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
LOC_Os01g18050.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
LOC_Os01g59150.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
LOC_Os02g07060.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
LOC_Os03g45920.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
MA_10431251g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 Archaeplastida
MA_251404g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
MA_55439g0010 No alias Tubulin beta-1 chain OS=Solanum tuberosum... 0.07 Archaeplastida
MA_7436374g0010 No alias Tubulin beta-6 chain OS=Zea mays (sp|q41783|tbb6_maize : 276.0) 0.03 Archaeplastida
MA_79708g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
MA_9451675g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
MA_947959g0010 No alias No annotation 0.05 Archaeplastida
MA_9578301g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Pp3c6_7500V3.1 No alias tubulin beta 8 0.05 Archaeplastida
Smo164404 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
Smo170592 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Smo402668 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 Archaeplastida
Solyc10g080940.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Solyc10g086760.2.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!