AT4G37630 (CYCD5;1)

Aliases : CYCD5;1

Description : cyclin d5;1

Gene families : OG0000252 (Archaeplastida) Phylogenetic Tree(s): OG0000252_tree ,
OG_05_0007410 (LandPlants) Phylogenetic Tree(s): OG_05_0007410_tree ,
OG_06_0004640 (SeedPlants) Phylogenetic Tree(s): OG_06_0004640_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G37630
Cluster	HCCA: Cluster_184

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00190p00017930	evm_27.TU.AmTr_v1...	Cell cycle.regulation.cyclins.CYCD-type cyclin	0.04	Archaeplastida
AT5G67260	CYCD3;2	CYCLIN D3;2	0.04	Archaeplastida
LOC_Os03g42070.1	No alias	cyclin (CYCD)	0.03	Archaeplastida
LOC_Os07g37010.1	No alias	cyclin (CYCD)	0.02	Archaeplastida
LOC_Os09g02360.1	No alias	cyclin (CYCD)	0.03	Archaeplastida
LOC_Os09g21450.1	No alias	cyclin (CYCD)	0.02	Archaeplastida
MA_10436212g0010	No alias	cyclin (CYCD)	0.03	Archaeplastida
MA_114375g0010	No alias	cyclin (CYCD)	0.03	Archaeplastida
MA_172842g0010	No alias	cyclin (CYCD)	0.03	Archaeplastida
Smo412774	No alias	Cell cycle.regulation.cyclins.CYCD-type cyclin	0.03	Archaeplastida
Zm00001e009441_P003	No alias	cyclin (CYCD)	0.03	Archaeplastida
Zm00001e022508_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e033498_P001	No alias	cyclin (CYCD)	0.03	Archaeplastida
Zm00001e034405_P005	No alias	cyclin (CYCD)	0.03	Archaeplastida
Zm00001e035215_P001	No alias	cyclin (CYCD)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	None	Extended
BP	GO:0000278	mitotic cell cycle	RCA	Interproscan
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0001933	negative regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	None	Extended
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-dependent DNA replication	None	Extended
BP	GO:0006469	negative regulation of protein kinase activity	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010440	stomatal lineage progression	RCA	Interproscan
BP	GO:0010563	negative regulation of phosphorus metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031400	negative regulation of protein modification process	None	Extended
BP	GO:0032268	regulation of cellular protein metabolic process	None	Extended
BP	GO:0032269	negative regulation of cellular protein metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033673	negative regulation of kinase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042023	DNA endoreduplication	IMP	Interproscan
BP	GO:0042023	DNA endoreduplication	RCA	Interproscan
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0042326	negative regulation of phosphorylation	None	Extended
BP	GO:0043086	negative regulation of catalytic activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0044786	cell cycle DNA replication	None	Extended
BP	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	RCA	Interproscan
BP	GO:0045786	negative regulation of cell cycle	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0045936	negative regulation of phosphate metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051348	negative regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	ISS	Interproscan
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0071901	negative regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097472	cyclin-dependent protein kinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended
BP	GO:1904030	negative regulation of cyclin-dependent protein kinase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0001872	(1->3)-beta-D-glucan binding	IEP	Neighborhood
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
CC	GO:0005741	mitochondrial outer membrane	IEP	Neighborhood
BP	GO:0006476	protein deacetylation	IEP	Neighborhood
BP	GO:0006626	protein targeting to mitochondrion	IEP	Neighborhood
BP	GO:0007163	establishment or maintenance of cell polarity	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0008308	voltage-gated anion channel activity	IEP	Neighborhood
MF	GO:0008469	histone-arginine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016273	arginine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016274	protein-arginine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016277	[myelin basic protein]-arginine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
BP	GO:0016575	histone deacetylation	IEP	Neighborhood
BP	GO:0018195	peptidyl-arginine modification	IEP	Neighborhood
BP	GO:0018216	peptidyl-arginine methylation	IEP	Neighborhood
BP	GO:0019919	peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	IEP	Neighborhood
BP	GO:0030010	establishment of cell polarity	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
BP	GO:0030856	regulation of epithelial cell differentiation	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0034969	histone arginine methylation	IEP	Neighborhood
BP	GO:0034970	histone H3-R2 methylation	IEP	Neighborhood
BP	GO:0034971	histone H3-R17 methylation	IEP	Neighborhood
BP	GO:0034972	histone H3-R26 methylation	IEP	Neighborhood
MF	GO:0035241	protein-arginine omega-N monomethyltransferase activity	IEP	Neighborhood
MF	GO:0035242	protein-arginine omega-N asymmetric methyltransferase activity	IEP	Neighborhood
BP	GO:0035246	peptidyl-arginine N-methylation	IEP	Neighborhood
BP	GO:0035247	peptidyl-arginine omega-N-methylation	IEP	Neighborhood
BP	GO:0035601	protein deacylation	IEP	Neighborhood
BP	GO:0045604	regulation of epidermal cell differentiation	IEP	Neighborhood
BP	GO:0045682	regulation of epidermis development	IEP	Neighborhood
CC	GO:0046658	anchored component of plasma membrane	IEP	Neighborhood
BP	GO:0048240	sperm capacitation	IEP	Neighborhood
BP	GO:0048859	formation of anatomical boundary	IEP	Neighborhood
BP	GO:0060341	regulation of cellular localization	IEP	Neighborhood
BP	GO:0070585	protein localization to mitochondrion	IEP	Neighborhood
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Neighborhood
BP	GO:0080154	regulation of fertilization	IEP	Neighborhood
BP	GO:0080155	regulation of double fertilization forming a zygote and endosperm	IEP	Neighborhood
BP	GO:0090451	cotyledon boundary formation	IEP	Neighborhood
BP	GO:0090691	formation of plant organ boundary	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood
BP	GO:0098732	macromolecule deacylation	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
BP	GO:1903827	regulation of cellular protein localization	IEP	Neighborhood
BP	GO:2000008	regulation of protein localization to cell surface	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006671	Cyclin_N	67	173

External Links

No external refs found!

AT4G37630 (CYCD5;1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation