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  5. Pp3c5_23010V3.1

Pp3c5_23010V3.1


Description : CLPC homologue 1


Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002249 (LandPlants) Phylogenetic Tree(s): OG_05_0002249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_23010V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00164160 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.07 Archaeplastida
AMTR_s00110p00042430 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.07 Archaeplastida
AT3G48870 HSP93-III,... Clp ATPase 0.03 Archaeplastida
AT5G50920 HSP93-V, DCA1,... CLPC homologue 1 0.04 Archaeplastida
Cpa|evm.model.tig00021365.4 No alias Chaperone protein ClpB1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre43.g760497 No alias Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os04g32560.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.05 Archaeplastida
LOC_Os12g12850.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.03 Archaeplastida
MA_229920g0010 No alias Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.07 Archaeplastida
MA_8117g0010 No alias ATP-dependent Clp protease ATP-binding subunit ClpA... 0.06 Archaeplastida
Mp1g02560.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.03 Archaeplastida
Mp3g09010.1 No alias organellar chaperone (Clp-p|Clp-m) 0.11 Archaeplastida
Smo439163 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Solyc12g042060.3.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.06 Archaeplastida
Zm00001e008312_P001 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.07 Archaeplastida
Zm00001e039805_P002 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.02 Archaeplastida
Zm00001e040778_P001 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR004176 Clp_N 116 168
IPR004176 Clp_N 192 243
IPR003959 ATPase_AAA_core 644 819
IPR003959 ATPase_AAA_core 307 436
IPR019489 Clp_ATPase_C 825 903
No external refs found!