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  5. Pp3c5_24480V3.1

Pp3c5_24480V3.1


Description : global transcription factor group B1


Gene families : OG0003491 (Archaeplastida) Phylogenetic Tree(s): OG0003491_tree ,
OG_05_0085932 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_24480V3.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00136890 evm_27.TU.AmTr_v1... Chromatin organisation.histone chaperone... 0.04 Archaeplastida
AT1G65440 GTB1 global transcription factor group B1 0.1 Archaeplastida
Cpa|evm.model.tig00001486.8 No alias Chromatin organisation.histone chaperone... 0.05 Archaeplastida
Cre09.g403182 No alias Chromatin organisation.histone chaperone... 0.03 Archaeplastida
GSVIVT01025815001 No alias Chromatin organisation.histone chaperone... 0.06 Archaeplastida
Gb_29261 No alias histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.04 Archaeplastida
LOC_Os05g41510.1 No alias histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.03 Archaeplastida
MA_13648g0010 No alias Transcription elongation factor SPT6 homolog... 0.04 Archaeplastida
MA_13648g0020 No alias histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.06 Archaeplastida
Mp2g25720.1 No alias histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.13 Archaeplastida
Pp3c5_23930V3.1 No alias global transcription factor group B1 0.06 Archaeplastida
Smo164675 No alias Chromatin organisation.histone chaperone... 0.05 Archaeplastida
Solyc10g081020.2.1 No alias histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.05 Archaeplastida
Zm00001e032018_P003 No alias histone chaperone (SPT6). component SPT6 of SPT6-IWS1... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!