Pp3c5_26440V3.1


Description : KNOTTED1-like homeobox gene 3


Gene families : OG0000263 (Archaeplastida) Phylogenetic Tree(s): OG0000263_tree ,
OG_05_0000128 (LandPlants) Phylogenetic Tree(s): OG_05_0000128_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_26440V3.1
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00162850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G62360 BUM1, SHL, STM,... KNOX/ELK homeobox transcription factor 0.04 Archaeplastida
AT1G62990 KNAT7, IXR11 KNOTTED-like homeobox of Arabidopsis thaliana 7 0.03 Archaeplastida
AT1G70510 KNAT2, ATK1 KNOTTED-like from Arabidopsis thaliana 2 0.02 Archaeplastida
AT5G25220 KNAT3 KNOTTED1-like homeobox gene 3 0.02 Archaeplastida
GSVIVT01004811001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
GSVIVT01009273001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01030488001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01038787001 No alias No description available 0.01 Archaeplastida
Gb_00573 No alias transcription factor (KNOX) 0.02 Archaeplastida
LOC_Os03g56140.1 No alias transcription factor (KNOX) 0.02 Archaeplastida
MA_3582g0010 No alias transcription factor (KNOX) 0.02 Archaeplastida
Pp3c19_5620V3.1 No alias KNOTTED-like from Arabidopsis thaliana 2 0.02 Archaeplastida
Solyc02g081120.4.1 No alias transcription factor (KNOX) 0.02 Archaeplastida
Solyc04g077210.3.1 No alias transcription factor (KNOX) 0.02 Archaeplastida
Solyc08g041820.3.1 No alias transcription factor (KNOX) 0.03 Archaeplastida
Zm00001e000173_P003 No alias transcription factor (KNOX) 0.03 Archaeplastida
Zm00001e005170_P001 No alias transcription factor (KNOX) 0.02 Archaeplastida
Zm00001e005547_P001 No alias transcription factor (KNOX) 0.02 Archaeplastida
Zm00001e012294_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027562_P001 No alias transcription factor (KNOX) 0.02 Archaeplastida
Zm00001e029453_P001 No alias transcription factor (KNOX) 0.02 Archaeplastida
Zm00001e039044_P001 No alias transcription factor (KNOX) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005540 KNOX1 273 308
IPR005541 KNOX2 330 378
IPR005539 ELK_dom 435 456
IPR008422 Homeobox_KN_domain 475 514
No external refs found!