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  5. Pp3c5_2780V3.1

Pp3c5_2780V3.1


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_2780V3.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT1G51190 PLT2 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01022081001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
LOC_Os06g05340.1 No alias transcription factor (AP2). RAM1-dependent transcription... 0.02 Archaeplastida
MA_121578g0010 No alias transcription factor (AP2) 0.01 Archaeplastida
MA_2193g0020 No alias transcription factor (AP2) 0.02 Archaeplastida
MA_639835g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_95471g0010 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc04g049800.3.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc07g018290.4.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc09g007260.4.1 No alias transcription factor (AP2) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!