1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c5_28230V3.1

Pp3c5_28230V3.1


Description : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein


Gene families : OG0005789 (Archaeplastida) Phylogenetic Tree(s): OG0005789_tree ,
OG_05_0003914 (LandPlants) Phylogenetic Tree(s): OG_05_0003914_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_28230V3.1
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Pp3c15_7550V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c15_7560V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c1_36710V3.1 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.02 Archaeplastida
Pp3c21_6600V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c21_8360V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c26_10350V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c26_7110V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c27_5570V3.1 No alias No annotation 0.01 Archaeplastida
Pp3c6_20590V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c8_8430V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!