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  5. Pp3c5_3050V3.1

Pp3c5_3050V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0006290 (Archaeplastida) Phylogenetic Tree(s): OG0006290_tree ,
OG_05_0006386 (LandPlants) Phylogenetic Tree(s): OG_05_0006386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_3050V3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.71 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
Cre06.g255400 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
LOC_Os06g44370.1 No alias protein factor U5-40kDa/snRNP40 of U5 small nuclear... 0.02 Archaeplastida
MA_10427747g0010 No alias protein factor U5-40kDa/snRNP40 of U5 small nuclear... 0.02 Archaeplastida
Zm00001e030429_P001 No alias protein factor U5-40kDa/snRNP40 of U5 small nuclear... 0.03 Archaeplastida
Zm00001e037716_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
CC GO:0061617 MICOS complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!