Pp3c5_4970V3.1


Description : transportin 1


Gene families : OG0004680 (Archaeplastida) Phylogenetic Tree(s): OG0004680_tree ,
OG_05_0004644 (LandPlants) Phylogenetic Tree(s): OG_05_0004644_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_4970V3.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT2G16950 ATTRN1, TRN1 transportin 1 0.04 Archaeplastida
Cpa|evm.model.tig00001239.7 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.01 Archaeplastida
Pp3c6_18200V3.1 No alias transportin 1 0.03 Archaeplastida
Zm00001e007506_P002 No alias IMB2 nucleocytoplasmic import karyopherin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!