1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c5_8660V3.1

Pp3c5_8660V3.1


Description : zinc finger (C3HC4-type RING finger) family protein


Gene families : OG0000316 (Archaeplastida) Phylogenetic Tree(s): OG0000316_tree ,
OG_05_0000889 (LandPlants) Phylogenetic Tree(s): OG_05_0000889_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_8660V3.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00103340 evm_27.TU.AmTr_v1... ATP-dependent RNA helicase DEAH12, chloroplastic... 0.03 Archaeplastida
GSVIVT01016056001 No alias Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01026257001 No alias Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_29625 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.03 Archaeplastida
LOC_Os09g11170.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.04 Archaeplastida
MA_10123705g0010 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
MA_132042g0010 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
Smo415256 No alias No description available 0.02 Archaeplastida
Solyc03g115920.3.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001906 cell killing IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0019835 cytolysis IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
BP GO:0031640 killing of cells of other organism IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044179 hemolysis in other organism IEP Neighborhood
BP GO:0044364 disruption of cells of other organism IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
CC GO:0046930 pore complex IEP Neighborhood
BP GO:0046931 pore complex assembly IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051715 cytolysis in other organism IEP Neighborhood
BP GO:0051801 cytolysis in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0051818 disruption of cells of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0051883 killing of cells in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052331 hemolysis in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!