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  5. Pp3c6_13440V3.1

Pp3c6_13440V3.1


Description : Vacuolar protein sorting 55 (VPS55) family protein


Gene families : OG0003578 (Archaeplastida) Phylogenetic Tree(s): OG0003578_tree ,
OG_05_0003023 (LandPlants) Phylogenetic Tree(s): OG_05_0003023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_13440V3.1
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00200270 evm_27.TU.AmTr_v1... Vacuolar protein sorting-associated protein 55 homolog... 0.04 Archaeplastida
AT1G32410 No alias Vacuolar protein sorting 55 (VPS55) family protein 0.02 Archaeplastida
Cre12.g491150 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.04 Archaeplastida
GSVIVT01033888001 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.03 Archaeplastida
Gb_05870 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.02 Archaeplastida
LOC_Os01g73570.2 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.04 Archaeplastida
LOC_Os02g55980.1 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.03 Archaeplastida
MA_82940g0010 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.02 Archaeplastida
Solyc08g077260.3.1 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.07 Archaeplastida
Solyc09g010170.3.1 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
InterPro domains Description Start Stop
IPR007262 VPS55 9 123
No external refs found!