Pp3c6_13890V3.1


Description : homolog of Xeroderma pigmentosum complementation group B 2


Gene families : OG0004927 (Archaeplastida) Phylogenetic Tree(s): OG0004927_tree ,
OG_05_0005344 (LandPlants) Phylogenetic Tree(s): OG_05_0005344_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_13890V3.1
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00265330 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
GSVIVT01019392001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
LOC_Os01g49680.1 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.04 Archaeplastida
MA_10436494g0010 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.02 Archaeplastida
Mp3g10960.1 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.02 Archaeplastida
Smo147068 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
Smo230853 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Solyc08g081340.4.1 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.02 Archaeplastida
Zm00001e020108_P001 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!