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  5. AT4G38460

AT4G38460 (GGR)


Aliases : GGR

Description : geranylgeranyl reductase


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0009623 (LandPlants) Phylogenetic Tree(s): OG_05_0009623_tree ,
OG_06_0006381 (SeedPlants) Phylogenetic Tree(s): OG_06_0006381_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G38460
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT3G14550 GGPS3 geranylgeranyl pyrophosphate synthase 3 0.04 Archaeplastida
Gb_21551 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida
Gb_39712 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_10268065g0010 No alias Geranylgeranyl pyrophosphate synthase, chloroplastic... 0.03 Archaeplastida
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
Zm00001e035362_P001 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004161 dimethylallyltranstransferase activity IDA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008506 sucrose:proton symporter activity IEP Neighborhood
MF GO:0008515 sucrose transmembrane transporter activity IEP Neighborhood
BP GO:0008643 carbohydrate transport IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
CC GO:0009528 plastid inner membrane IEP Neighborhood
MF GO:0009669 sucrose:cation symporter activity IEP Neighborhood
CC GO:0009706 chloroplast inner membrane IEP Neighborhood
BP GO:0009854 oxidative photosynthetic carbon pathway IEP Neighborhood
BP GO:0009915 phloem sucrose loading IEP Neighborhood
BP GO:0010232 vascular transport IEP Neighborhood
BP GO:0010233 phloem transport IEP Neighborhood
MF GO:0015154 disaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP Neighborhood
BP GO:0015766 disaccharide transport IEP Neighborhood
BP GO:0015770 sucrose transport IEP Neighborhood
BP GO:0015772 oligosaccharide transport IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
CC GO:0016602 CCAAT-binding factor complex IEP Neighborhood
MF GO:0016618 hydroxypyruvate reductase activity IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0030267 glyoxylate reductase (NADP) activity IEP Neighborhood
CC GO:0031969 chloroplast membrane IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0048513 animal organ development IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 75 267
No external refs found!