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  5. Pp3c6_15300V3.1

Pp3c6_15300V3.1


Description : nucleotide-rhamnose synthase/epimerase-reductase


Gene families : OG0000898 (Archaeplastida) Phylogenetic Tree(s): OG0000898_tree ,
OG_05_0005574 (LandPlants) Phylogenetic Tree(s): OG_05_0005574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_15300V3.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00150410 evm_27.TU.AmTr_v1... Carbohydrate metabolism.nucleotide sugar... 0.03 Archaeplastida
AT3G14790 ATRHM3, RHM3 rhamnose biosynthesis 3 0.05 Archaeplastida
Cre09.g387171 No alias Carbohydrate metabolism.nucleotide sugar... 0.02 Archaeplastida
Gb_07837 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
Gb_35655 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
LOC_Os02g45540.1 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
MA_10105635g0010 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
Mp1g04880.1 No alias UDP-L-rhamnose synthase 0.08 Archaeplastida
Mp6g02720.1 No alias UDP-L-rhamnose synthase 0.03 Archaeplastida
Pp3c6_15170V3.1 No alias rhamnose biosynthesis 1 0.04 Archaeplastida
Solyc08g069110.3.1 No alias UDP-L-rhamnose synthase 0.04 Archaeplastida
Solyc08g080140.4.1 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
Solyc10g007480.4.1 No alias UDP-L-rhamnose synthase 0.03 Archaeplastida
Zm00001e015435_P001 No alias UDP-L-rhamnose synthase 0.03 Archaeplastida
Zm00001e038472_P001 No alias UDP-L-rhamnose synthase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 14 187
No external refs found!