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  5. Pp3c6_15550V3.1

Pp3c6_15550V3.1


Description : polyribonucleotide nucleotidyltransferase, putative


Gene families : OG0001869 (Archaeplastida) Phylogenetic Tree(s): OG0001869_tree ,
OG_05_0002404 (LandPlants) Phylogenetic Tree(s): OG_05_0002404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_15550V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00095690 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.06 Archaeplastida
AT3G03710 RIF10, PNP polyribonucleotide nucleotidyltransferase, putative 0.12 Archaeplastida
Cpa|evm.model.tig00020603.85 No alias RNA processing.organelle machineries.ribonuclease... 0.01 Archaeplastida
GSVIVT01029958001 No alias RNA processing.organelle machineries.ribonuclease... 0.06 Archaeplastida
GSVIVT01032436001 No alias RNA processing.organelle machineries.ribonuclease... 0.02 Archaeplastida
Gb_15670 No alias polynucleotide phosphorylase (PNP) 0.05 Archaeplastida
Mp4g17520.1 No alias polynucleotide phosphorylase (PNP) 0.09 Archaeplastida
Smo77425 No alias RNA processing.organelle machineries.ribonuclease... 0.02 Archaeplastida
Solyc08g066120.4.1 No alias polynucleotide phosphorylase (PNP) 0.04 Archaeplastida
Solyc08g066140.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e032889_P001 No alias polynucleotide phosphorylase (PNP) 0.13 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!