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  5. Pp3c6_15720V3.1

Pp3c6_15720V3.1


Description : DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases


Gene families : OG0007221 (Archaeplastida) Phylogenetic Tree(s): OG0007221_tree ,
OG_05_0005184 (LandPlants) Phylogenetic Tree(s): OG_05_0005184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_15720V3.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_25280V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.02 Archaeplastida
Pp3c13_14630V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c2_18826V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 Archaeplastida
Pp3c2_390V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 Archaeplastida
Pp3c4_24900V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c9_12701V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 1 90
IPR006134 DNA-dir_DNA_pol_B_multi_dom 199 594
No external refs found!