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  5. Pp3c6_17940V3.1

Pp3c6_17940V3.1


Description : cation-chloride co-transporter 1


Gene families : OG0002148 (Archaeplastida) Phylogenetic Tree(s): OG0002148_tree ,
OG_05_0002611 (LandPlants) Phylogenetic Tree(s): OG_05_0002611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_17940V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00043650 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
AT1G30450 CCC1, ATCCC1, HAP5 cation-chloride co-transporter 1 0.02 Archaeplastida
GSVIVT01021607001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
LOC_Os08g23440.1 No alias cation:chloride co-transporter (CCC) 0.02 Archaeplastida
MA_10427303g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo150343 No alias Solute transport.carrier-mediated transport.APC... 0.05 Archaeplastida
Solyc02g021620.3.1 No alias cation:chloride co-transporter (CCC) 0.02 Archaeplastida
Solyc02g070290.3.1 No alias cation:chloride co-transporter (CCC) 0.04 Archaeplastida
Zm00001e024158_P004 No alias cation:chloride co-transporter (CCC) 0.02 Archaeplastida
Zm00001e026894_P001 No alias cation:chloride co-transporter (CCC) 0.07 Archaeplastida
Zm00001e031474_P001 No alias cation:chloride co-transporter (CCC) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!