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  5. Pp3c6_18000V3.1

Pp3c6_18000V3.1


Description : histone mono-ubiquitination 1


Gene families : OG0001773 (Archaeplastida) Phylogenetic Tree(s): OG0001773_tree ,
OG_05_0002127 (LandPlants) Phylogenetic Tree(s): OG_05_0002127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_18000V3.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AT1G55250 HUB2 histone mono-ubiquitination 2 0.05 Archaeplastida
Cpa|evm.model.tig00000169.18 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Cre14.g625802 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01018223001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
GSVIVT01025404001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_15023 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
MA_10425980g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10430809g0020 No alias RING-HC-class E3 ligase 0.04 Archaeplastida
MA_10433679g0010 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Smo175555 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Zm00001e013143_P005 No alias RING-HC-class E3 ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!