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  5. Pp3c6_18200V3.1

Pp3c6_18200V3.1


Description : transportin 1


Gene families : OG0004680 (Archaeplastida) Phylogenetic Tree(s): OG0004680_tree ,
OG_05_0004644 (LandPlants) Phylogenetic Tree(s): OG_05_0004644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_18200V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT2G16950 ATTRN1, TRN1 transportin 1 0.03 Archaeplastida
Cpa|evm.model.tig00001239.7 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.01 Archaeplastida
Cre12.g520550 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
GSVIVT01023974001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 Archaeplastida
Gb_11406 No alias IMB2 nucleocytoplasmic import karyopherin 0.04 Archaeplastida
MA_10296g0010 No alias Transportin-1 OS=Oryza sativa subsp. indica... 0.05 Archaeplastida
MA_38893g0010 No alias Transportin-1 OS=Oryza sativa subsp. indica... 0.05 Archaeplastida
Mp7g05740.1 No alias IMB2 nucleocytoplasmic import karyopherin 0.04 Archaeplastida
Pp3c5_4970V3.1 No alias transportin 1 0.03 Archaeplastida
Smo175519 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Solyc01g111780.4.1 No alias IMB2 nucleocytoplasmic import karyopherin 0.09 Archaeplastida
Zm00001e007506_P002 No alias IMB2 nucleocytoplasmic import karyopherin 0.03 Archaeplastida
Zm00001e042007_P001 No alias IMB2 nucleocytoplasmic import karyopherin 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
MF GO:0048365 Rac GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!