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  5. Pp3c6_1870V3.1

Pp3c6_1870V3.1


Description : Polynucleotidyl transferase, ribonuclease H-like superfamily protein


Gene families : OG0001784 (Archaeplastida) Phylogenetic Tree(s): OG0001784_tree ,
OG_05_0003762 (LandPlants) Phylogenetic Tree(s): OG_05_0003762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_1870V3.1
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00163p00014030 evm_27.TU.AmTr_v1... Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00163p00015730 evm_27.TU.AmTr_v1... Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os04g39260.3 No alias poly(A)-specific ribonuclease (PARN) 0.03 Archaeplastida
LOC_Os08g34160.1 No alias Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis... 0.02 Archaeplastida
Mp7g07380.1 No alias Poly(A)-specific ribonuclease PARN OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e041044_P006 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR006941 RNase_CAF1 125 595
No external refs found!