1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c6_20300V3.1

Pp3c6_20300V3.1


Description : cytochrome b6f complex subunit (petM), putative


Gene families : OG0007312 (Archaeplastida) Phylogenetic Tree(s): OG0007312_tree ,
OG_05_0006288 (LandPlants) Phylogenetic Tree(s): OG_05_0006288_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_20300V3.1
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00208110 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 Archaeplastida
AT2G26500 No alias cytochrome b6f complex subunit (petM), putative 0.03 Archaeplastida
Gb_00822 No alias component PetM/VII of cytochrome b6/f complex 0.03 Archaeplastida
LOC_Os03g55720.2 No alias component PetM/VII of cytochrome b6/f complex 0.08 Archaeplastida
MA_10294942g0010 No alias component PetM/VII of cytochrome b6/f complex 0.04 Archaeplastida
Mp1g07170.1 No alias component PetM/VII of cytochrome b6/f complex 0.12 Archaeplastida
Solyc01g109040.4.1 No alias component PetM/VII of cytochrome b6/f complex 0.07 Archaeplastida
Zm00001e005795_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e011966_P002 No alias component PetM/VII of cytochrome b6/f complex 0.05 Archaeplastida
Zm00001e011967_P001 No alias component PetM/VII of cytochrome b6/f complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009512 cytochrome b6f complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR012595 PetM_cyt_b6/f_cplx_su7 88 114
No external refs found!