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  5. Pp3c6_20400V3.1

Pp3c6_20400V3.1


Description : chaperonin 60 beta


Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree ,
OG_05_0001792 (LandPlants) Phylogenetic Tree(s): OG_05_0001792_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_20400V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00260480 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.05 Archaeplastida
AMTR_s00062p00185880 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.06 Archaeplastida
AMTR_s00106p00119930 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.04 Archaeplastida
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.06 Archaeplastida
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.15 Archaeplastida
ChrSy.fgenesh.mRNA.28 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Cpa|evm.model.tig00001107.20 No alias RuBisCO large subunit-binding protein subunit alpha,... 0.01 Archaeplastida
Cpa|evm.model.tig00001269.7 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre04.g231222 No alias External stimuli response.temperature.Hsp... 0.07 Archaeplastida
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Cre17.g741450 No alias External stimuli response.temperature.Hsp... 0.12 Archaeplastida
GSVIVT01010149001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Gb_25193 No alias RuBisCO large subunit-binding protein subunit beta,... 0.02 Archaeplastida
LOC_Os06g02380.2 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
LOC_Os12g17910.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.08 Archaeplastida
MA_542957g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.03 Archaeplastida
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.11 Archaeplastida
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.12 Archaeplastida
Smo168153 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Solyc01g028810.3.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Solyc03g120850.4.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.12 Archaeplastida
Zm00001e029825_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.07 Archaeplastida
Zm00001e031536_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 79 581
No external refs found!