Pp3c6_25040V3.1


Description : No annotation


Gene families : OG0002924 (Archaeplastida) Phylogenetic Tree(s): OG0002924_tree ,
OG_05_0007883 (LandPlants) Phylogenetic Tree(s): OG_05_0007883_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_25040V3.1
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00134460 evm_27.TU.AmTr_v1... RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.04 Archaeplastida
AT4G38440 No alias LOCATED IN: chloroplast; EXPRESSED IN: 21 plant... 0.04 Archaeplastida
GSVIVT01023952001 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.04 Archaeplastida
Gb_24051 No alias MINIYO RNA polymerase regulator protein 0.03 Archaeplastida
LOC_Os06g37640.1 No alias MINIYO RNA polymerase regulator protein 0.06 Archaeplastida
MA_10430757g0010 No alias Transcriptional elongation regulator MINIYO... 0.04 Archaeplastida
MA_10436615g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Smo409136 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.04 Archaeplastida
Solyc01g111910.3.1 No alias MINIYO RNA polymerase regulator protein 0.03 Archaeplastida
Zm00001e037287_P001 No alias MINIYO RNA polymerase regulator protein 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!