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  5. Pp3c6_25240V3.1

Pp3c6_25240V3.1


Description : Vacuolar sorting protein 39


Gene families : OG0006340 (Archaeplastida) Phylogenetic Tree(s): OG0006340_tree ,
OG_05_0005906 (LandPlants) Phylogenetic Tree(s): OG_05_0005906_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_25240V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
MA_1271g0010 No alias CORVET-specific component VPS3 of HOPS/CORVET membrane... 0.02 Archaeplastida
Zm00001e029702_P001 No alias CORVET-specific component VPS3 of HOPS/CORVET membrane... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!