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  5. Pp3c6_25280V3.1

Pp3c6_25280V3.1


Description : Cam interacting protein 111


Gene families : OG0000169 (Archaeplastida) Phylogenetic Tree(s): OG0000169_tree ,
OG_05_0007202 (LandPlants) Phylogenetic Tree(s): OG_05_0007202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_25280V3.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00071550 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog C... 0.03 Archaeplastida
AT3G01610 emb1354, CDC48C cell division cycle 48C 0.03 Archaeplastida
AT3G56690 CIP111 Cam interacting protein 111 0.02 Archaeplastida
Cpa|evm.model.tig00000525.10 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
Cre09.g398550 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
GSVIVT01025783001 No alias Calmodulin-interacting protein 111 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_01408 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.02 Archaeplastida
Gb_20751 No alias component Pex1 of Pex1-Pex6 subcomplex 0.03 Archaeplastida
LOC_Os06g01980.1 No alias Cell division control protein 48 homolog C... 0.05 Archaeplastida
LOC_Os11g11340.1 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.02 Archaeplastida
Mp1g25630.1 No alias platform ATPase (CDC48) 0.03 Archaeplastida
Pp3c17_21090V3.1 No alias peroxin 6 0.02 Archaeplastida
Solyc01g068330.4.1 No alias Cell division control protein 48 homolog C... 0.03 Archaeplastida
Solyc05g012190.3.1 No alias Cell division control protein 48 homolog B... 0.03 Archaeplastida
Solyc10g078320.2.1 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e021405_P001 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e035514_P002 No alias Cell division control protein 48 homolog C... 0.03 Archaeplastida
Zm00001e036688_P001 No alias Cell division control protein 48 homolog C... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!