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  5. Pp3c6_25940V3.1

Pp3c6_25940V3.1


Description : glycosyl hydrolase 9C2


Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0085970 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_25940V3.1
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00246860 evm_27.TU.AmTr_v1... Endoglucanase 23 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00027p00247670 evm_27.TU.AmTr_v1... Endoglucanase 23 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00224p00022980 evm_27.TU.AmTr_v1... Endoglucanase 10 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00224p00023160 evm_27.TU.AmTr_v1... Endoglucanase 24 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AT1G02800 ATCEL2, CEL2 cellulase 2 0.03 Archaeplastida
AT1G23210 AtGH9B6, GH9B6 glycosyl hydrolase 9B6 0.02 Archaeplastida
AT1G48930 AtGH9C1, GH9C1 glycosyl hydrolase 9C1 0.02 Archaeplastida
AT1G64390 GH9C2, AtGH9C2 glycosyl hydrolase 9C2 0.03 Archaeplastida
AT2G32990 AtGH9B8, GH9B8 glycosyl hydrolase 9B8 0.02 Archaeplastida
AT4G39000 GH9B17, AtGH9B17 glycosyl hydrolase 9B17 0.03 Archaeplastida
Cre06.g270500 No alias Endoglucanase 12 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01019523001 No alias Endoglucanase 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01037210001 No alias Cell wall.cellulose.degradation.endo-1,4-beta-glucanase 0.04 Archaeplastida
GSVIVT01037709001 No alias Endoglucanase 11 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_09934 No alias Endoglucanase 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_26728 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_32668 No alias Endoglucanase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g12030.1 No alias Endoglucanase 1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os01g21070.1 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g05744.1 No alias Endoglucanase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g53820.1 No alias Endoglucanase 8 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os04g36610.1 No alias endo-1,4-beta-glucanase 0.02 Archaeplastida
LOC_Os08g29770.1 No alias Endoglucanase 20 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os09g36060.1 No alias Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10431918g0010 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_42717g0010 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp2g26250.1 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c4_23640V3.1 No alias glycosyl hydrolase 9B7 0.03 Archaeplastida
Pp3c5_9540V3.1 No alias glycosyl hydrolase 9A1 0.03 Archaeplastida
Smo144066 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo234652 No alias Endoglucanase 6 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc12g055970.3.1 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e013509_P001 No alias Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e015739_P002 No alias Endoglucanase 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e015765_P001 No alias Endoglucanase 7 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e026190_P002 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e029192_P001 No alias Endoglucanase 19 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e030964_P003 No alias Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e034793_P002 No alias Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e041926_P001 No alias Endoglucanase 13 OS=Oryza sativa subsp. indica... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004357 glutamate-cysteine ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!