1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G39060

AT4G39060


Description : BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G19250.1); Has 375 Blast hits to 365 proteins in 7 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 367; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).


Gene families : OG0001235 (Archaeplastida) Phylogenetic Tree(s): OG0001235_tree ,
OG_05_0000768 (LandPlants) Phylogenetic Tree(s): OG_05_0000768_tree ,
OG_06_0000384 (SeedPlants) Phylogenetic Tree(s): OG_06_0000384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39060
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT1G19930 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT1G60570 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 Archaeplastida
AT1G61540 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
AT2G22030 No alias Galactose oxidase/kelch repeat superfamily protein 0.14 Archaeplastida
AT2G22050 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT2G22060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.06 Archaeplastida
AT2G41360 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT2G44630 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT3G08810 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT3G43710 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.1 Archaeplastida
AT4G19250 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 Archaeplastida
AT4G19330 No alias Galactose oxidase/kelch repeat superfamily protein 0.14 Archaeplastida
AT4G19870 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT4G23580 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 Archaeplastida
AT4G29370 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT4G33900 No alias Galactose oxidase/kelch repeat superfamily protein 0.14 Archaeplastida
AT4G39290 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G39590 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 Archaeplastida
AT4G39600 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G39753 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT4G39760 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 Archaeplastida
AT5G02980 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT5G38670 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT5G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 Archaeplastida
AT5G48980 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!