Pp3c6_27040V3.1

Description : Nucleic acid-binding, OB-fold-like protein

Gene families : OG0003817 (Archaeplastida) Phylogenetic Tree(s): OG0003817_tree ,
OG_05_0086160 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c6_27040V3.1
Cluster	HCCA: Cluster_192

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000194.27	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	Archaeplastida
Cre12.g510450	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.1	Archaeplastida
GSVIVT01033420001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.04	Archaeplastida
LOC_Os10g27174.1	No alias	component RPS28 of SSU proteome	0.02	Archaeplastida
MA_10206328g0010	No alias	component RPS28 of SSU proteome	0.04	Archaeplastida
Mp3g15160.1	No alias	component RPS28 of SSU proteome	0.04	Archaeplastida
Pp3c1_28770V3.1	No alias	Nucleic acid-binding, OB-fold-like protein	0.07	Archaeplastida
Smo170205	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	Archaeplastida
Zm00001e000507_P001	No alias	component RPS28 of SSU proteome	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000289	Ribosomal_S28e	5	50

External Links

No external refs found!

Pp3c6_27040V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation