Pp3c6_28550V3.1


Description : No annotation


Gene families : OG0000171 (Archaeplastida) Phylogenetic Tree(s): OG0000171_tree ,
OG_05_0001346 (LandPlants) Phylogenetic Tree(s): OG_05_0001346_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_28550V3.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000142.8 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
Cpa|evm.model.tig00000194.64 No alias Dynein-1-alpha heavy chain, flagellar inner arm I1... 0.05 Archaeplastida
Cpa|evm.model.tig00000404.38 No alias Cytoskeleton.microtubular network.Dynein... 0.02 Archaeplastida
Cpa|evm.model.tig00000828.12 No alias Cytoskeleton.microtubular network.Dynein... 0.02 Archaeplastida
Cpa|evm.model.tig00001206.27 No alias Dynein-1-alpha heavy chain, flagellar inner arm I1... 0.02 Archaeplastida
Cpa|evm.model.tig00001206.29 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.02 Archaeplastida
Cpa|evm.model.tig00001206.30 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.04 Archaeplastida
Cpa|evm.model.tig00020684.47 No alias Cytoskeleton.microtubular network.Dynein... 0.02 Archaeplastida
Cpa|evm.model.tig00021017.28 No alias Dynein gamma chain, flagellar outer arm OS=Chlamydomonas... 0.02 Archaeplastida
Cpa|evm.model.tig00022075.30 No alias Cytoskeleton.microtubular network.Dynein... 0.03 Archaeplastida
Cre02.g141606 No alias Cytoskeleton.microtubular network.Dynein... 0.02 Archaeplastida
Cre03.g145127 No alias Cytoskeleton.microtubular network.Dynein... 0.03 Archaeplastida
Cre05.g244250 No alias Cytoskeleton.microtubular network.Dynein... 0.04 Archaeplastida
Cre06.g250300 No alias Cytoskeleton.microtubular network.Dynein... 0.03 Archaeplastida
Cre06.g265950 No alias Cytoskeleton.microtubular network.Dynein... 0.01 Archaeplastida
Cre09.g392282 No alias Cytoskeleton.microtubular network.Dynein... 0.05 Archaeplastida
Cre09.g403800 No alias Cytoskeleton.microtubular network.Dynein... 0.03 Archaeplastida
Cre11.g476050 No alias Cytoskeleton.microtubular network.Dynein... 0.03 Archaeplastida
Cre12.g484250 No alias Cytoskeleton.microtubular network.Dynein... 0.04 Archaeplastida
Cre14.g624950 No alias Cytoskeleton.microtubular network.Dynein... 0.05 Archaeplastida
Cre14.g627576 No alias Cytoskeleton.microtubular network.Dynein... 0.04 Archaeplastida
Cre16.g685450 No alias Cytoskeleton.microtubular network.Dynein... 0.05 Archaeplastida
Gb_31253 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.01 Archaeplastida
Mp4g14660.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.02 Archaeplastida
Mp5g13570.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.02 Archaeplastida
Mp8g13870.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0010970 transport along microtubule IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0031503 protein-containing complex localization IEP Neighborhood
BP GO:0042073 intraciliary transport IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0099111 microtubule-based transport IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013602 Dynein_heavy_dom-2 564 965
IPR024317 Dynein_heavy_chain_D4_dom 2078 2337
IPR035706 DHC_D5 2726 2946
IPR035699 AAA_6 1093 1419
IPR024743 Dynein_HC_stalk 2351 2696
IPR004273 Dynein_heavy_dom 3191 3311
No external refs found!