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  5. Pp3c6_29680V3.1

Pp3c6_29680V3.1


Description : zinc knuckle (CCHC-type) family protein


Gene families : OG0003037 (Archaeplastida) Phylogenetic Tree(s): OG0003037_tree ,
OG_05_0002894 (LandPlants) Phylogenetic Tree(s): OG_05_0002894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_29680V3.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00212560 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT5G49930 emb1441 zinc knuckle (CCHC-type) family protein 0.03 Archaeplastida
GSVIVT01034941001 No alias No description available 0.05 Archaeplastida
Gb_15415 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_18390 No alias component RQC2 of Ribosome-associated Quality Control... 0.03 Archaeplastida
MA_195017g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g00940.1 No alias component RQC2 of Ribosome-associated Quality Control... 0.04 Archaeplastida
Smo266749 No alias No description available 0.06 Archaeplastida
Smo405643 No alias No description available 0.03 Archaeplastida
Solyc01g057840.3.1 No alias component RQC2 of Ribosome-associated Quality Control... 0.05 Archaeplastida
Zm00001e018194_P001 No alias component RQC2 of Ribosome-associated Quality Control... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!