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  5. Pp3c6_5960V3.1

Pp3c6_5960V3.1


Description : F-box/RNI-like superfamily protein


Gene families : OG0006137 (Archaeplastida) Phylogenetic Tree(s): OG0006137_tree ,
OG_05_0005187 (LandPlants) Phylogenetic Tree(s): OG_05_0005187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_5960V3.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Pp3c18_4900V3.1 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
Pp3c20_15890V3.1 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
Pp3c20_15990V3.1 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
Pp3c20_20740V3.1 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
Pp3c20_20820V3.1 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
Pp3c3_35860V3.1 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
Pp3c6_11910V3.1 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
Pp3c6_5500V3.1 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
Pp3c6_5549V3.1 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
Pp3c6_5570V3.1 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
Pp3c6_5640V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c6_5660V3.1 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
Pp3c6_8180V3.1 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
Pp3c9_10240V3.1 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
Pp3c9_16320V3.1 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!