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  5. Pp3c6_6220V3.1

Pp3c6_6220V3.1


Description : gibberellin 20-oxidase 3


Gene families : OG0000036 (Archaeplastida) Phylogenetic Tree(s): OG0000036_tree ,
OG_05_0010957 (LandPlants) Phylogenetic Tree(s): OG_05_0010957_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_6220V3.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00193860 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 Archaeplastida
AT1G17020 SRG1, ATSRG1 senescence-related gene 1 0.02 Archaeplastida
GSVIVT01013255001 No alias S-norcoclaurine synthase 1 OS=Coptis japonica 0.03 Archaeplastida
GSVIVT01021334001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01021349001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021352001 No alias Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase... 0.04 Archaeplastida
GSVIVT01031814001 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.05 Archaeplastida
Gb_01615 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
Gb_01811 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.02 Archaeplastida
Gb_15462 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.04 Archaeplastida
Gb_18191 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_18198 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28766 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g41954.1 No alias no description available(sp|q7xp65|g2ox6_orysj : 415.0)... 0.04 Archaeplastida
LOC_Os03g18030.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
LOC_Os10g40934.1 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.03 Archaeplastida
LOC_Os10g40960.1 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.05 Archaeplastida
LOC_Os10g40990.1 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.02 Archaeplastida
MA_164438g0010 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_428072g0010 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_678151g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_70464g0010 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_958517g0010 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
Mp3g16920.1 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.04 Archaeplastida
Solyc02g080120.3.1 No alias Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g005120.2.1 No alias Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g076670.3.1 No alias Probable 2-oxoglutarate-dependent dioxygenase JRG21... 0.04 Archaeplastida
Solyc10g086780.2.1 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.02 Archaeplastida
Zm00001e001310_P002 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
Zm00001e001718_P001 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e002116_P001 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e012438_P001 No alias Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e015173_P002 No alias no description available(sp|q7xp65|g2ox6_orysj : 423.0)... 0.02 Archaeplastida
Zm00001e028806_P001 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
Zm00001e031061_P001 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.03 Archaeplastida
Zm00001e038422_P001 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!