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  5. Pp3c6_8810V3.1

Pp3c6_8810V3.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0003624 (Archaeplastida) Phylogenetic Tree(s): OG0003624_tree ,
OG_05_0004056 (LandPlants) Phylogenetic Tree(s): OG_05_0004056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_8810V3.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AT5G16280 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 Archaeplastida
Cre01.g024400 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.02 Archaeplastida
GSVIVT01022591001 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.06 Archaeplastida
Gb_19012 No alias component TRS85 of TRAPP-III complex-specific components 0.11 Archaeplastida
LOC_Os03g57300.1 No alias component TRS85 of TRAPP-III complex-specific components 0.01 Archaeplastida
MA_239707g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp6g07480.1 No alias component TRS85 of TRAPP-III complex-specific components 0.07 Archaeplastida
Smo113725 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.05 Archaeplastida
Solyc01g006960.3.1 No alias component TRS85 of TRAPP-III complex-specific components 0.14 Archaeplastida
Zm00001e005920_P002 No alias component TRS85 of TRAPP-III complex-specific components 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!