1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G39590

AT4G39590


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0001235 (Archaeplastida) Phylogenetic Tree(s): OG0001235_tree ,
OG_05_0000768 (LandPlants) Phylogenetic Tree(s): OG_05_0000768_tree ,
OG_06_0000384 (SeedPlants) Phylogenetic Tree(s): OG_06_0000384_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39590
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT1G19930 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT1G60570 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT2G03460 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT2G20380 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT2G22030 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT2G41360 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT2G44030 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 Archaeplastida
AT2G45406 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT3G09750 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
AT3G24610 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
AT3G43710 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G02310 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
AT4G19330 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT4G23580 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G29370 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G33900 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 Archaeplastida
AT4G34170 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G35120 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT4G39060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.09 Archaeplastida
AT4G39290 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT4G39750 No alias F-box family protein-related 0.07 Archaeplastida
AT4G39756 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT4G39760 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT5G02980 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT5G02990 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 Archaeplastida
AT5G03000 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 Archaeplastida
AT5G03010 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT5G28160 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT5G38670 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
AT5G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT5G48980 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT5G51250 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009687 abscisic acid metabolic process IEP Neighborhood
BP GO:0009688 abscisic acid biosynthetic process IEP Neighborhood
BP GO:0010222 stem vascular tissue pattern formation IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
BP GO:0043288 apocarotenoid metabolic process IEP Neighborhood
BP GO:0043289 apocarotenoid biosynthetic process IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:1902644 tertiary alcohol metabolic process IEP Neighborhood
BP GO:1902645 tertiary alcohol biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 37 81
IPR006652 Kelch_1 188 226
IPR006652 Kelch_1 138 185
No external refs found!