Pp3c6_9210V3.1


Description : U2 snRNP auxilliary factor, large subunit, splicing factor


Gene families : OG0000654 (Archaeplastida) Phylogenetic Tree(s): OG0000654_tree ,
OG_05_0001447 (LandPlants) Phylogenetic Tree(s): OG_05_0001447_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_9210V3.1
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
Cre07.g352650 No alias No description available 0.02 Archaeplastida
Cre09.g391949 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 Archaeplastida
Cre16.g695450 No alias No description available 0.01 Archaeplastida
GSVIVT01027871001 No alias Splicing factor U2af large subunit A OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_01578 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 Archaeplastida
MA_10429502g0010 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 Archaeplastida
Mp6g18910.1 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 Archaeplastida
Solyc09g090420.4.1 No alias Splicing factor U2af large subunit B OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e038951_P001 No alias Splicing factor U2af large subunit A OS=Nicotiana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 198 269
IPR000504 RRM_dom 319 389
No external refs found!