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  5. Pp3c7_14910V3.1

Pp3c7_14910V3.1


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG0002890 (Archaeplastida) Phylogenetic Tree(s): OG0002890_tree ,
OG_05_0002756 (LandPlants) Phylogenetic Tree(s): OG_05_0002756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_14910V3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000203.32 No alias RNA processing.messenger ribonucleoprotein particle... 0.05 Archaeplastida
Cre06.g306850 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
Smo160867 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
Smo447130 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
Solyc04g082790.4.1 No alias DBP5/LOS4 ATP-dependent helicase 0.03 Archaeplastida
Zm00001e000442_P003 No alias DBP5/LOS4 ATP-dependent helicase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0051287 NAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 322 443
IPR011545 DEAD/DEAH_box_helicase_dom 111 284
No external refs found!