1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G40050

AT4G40050


Description : Protein of unknown function (DUF3550/UPF0682)


Gene families : OG0003174 (Archaeplastida) Phylogenetic Tree(s): OG0003174_tree ,
OG_05_0002522 (LandPlants) Phylogenetic Tree(s): OG_05_0002522_tree ,
OG_06_0002628 (SeedPlants) Phylogenetic Tree(s): OG_06_0002628_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G40050
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Solyc01g081030.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
BP GO:0000919 cell plate assembly IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0001727 lipid kinase activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006625 protein targeting to peroxisome IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008481 sphinganine kinase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009268 response to pH IEP Neighborhood
CC GO:0009504 cell plate IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009934 regulation of meristem structural organization IEP Neighborhood
BP GO:0010029 regulation of seed germination IEP Neighborhood
BP GO:0010044 response to aluminum ion IEP Neighborhood
BP GO:0010101 post-embryonic root morphogenesis IEP Neighborhood
BP GO:0010102 lateral root morphogenesis IEP Neighborhood
BP GO:0010187 negative regulation of seed germination IEP Neighborhood
BP GO:0010191 mucilage metabolic process IEP Neighborhood
BP GO:0010192 mucilage biosynthetic process IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010447 response to acidic pH IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015919 peroxisomal membrane transport IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016558 protein import into peroxisome matrix IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017050 D-erythro-sphingosine kinase activity IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
CC GO:0030427 site of polarized growth IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
BP GO:0032456 endocytic recycling IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
CC GO:0034399 nuclear periphery IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
CC GO:0035838 growing cell tip IEP Neighborhood
BP GO:0042814 monopolar cell growth IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0043230 extracellular organelle IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043574 peroxisomal transport IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
CC GO:0044463 cell projection part IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP Neighborhood
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP Neighborhood
BP GO:0048581 negative regulation of post-embryonic development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0051093 negative regulation of developmental process IEP Neighborhood
BP GO:0051241 negative regulation of multicellular organismal process IEP Neighborhood
CC GO:0051286 cell tip IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:0070062 extracellular exosome IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071215 cellular response to abscisic acid stimulus IEP Neighborhood
BP GO:0071396 cellular response to lipid IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072662 protein localization to peroxisome IEP Neighborhood
BP GO:0072663 establishment of protein localization to peroxisome IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
BP GO:0080119 ER body organization IEP Neighborhood
CC GO:0090404 pollen tube tip IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:0097306 cellular response to alcohol IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
CC GO:0120038 plasma membrane bounded cell projection part IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1900140 regulation of seedling development IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901703 protein localization involved in auxin polar transport IEP Neighborhood
BP GO:1902584 positive regulation of response to water deprivation IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
CC GO:1903561 extracellular vesicle IEP Neighborhood
BP GO:2000070 regulation of response to water deprivation IEP Neighborhood
InterPro domains Description Start Stop
IPR022709 SCAI 13 549
No external refs found!